rs49551441 SNP Detail

Summary

• ID
  rs49551441
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:8515549 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGCTAGAA AACCTCAAGG
  ATAGTCTGCA TAGTAATTAC TTAGGACAAT AATGAGTCAC ACCCAAACAC AGGAATACAC
  AATGGCCTAG GAAATAGGTA GGTTGTAGTA TTATTCATGA AAGGGTTAGT GGAACAGAAT
  TCCCCTTGTG CAGATTTGTC ACTTAGGCCC ACAAATAGCA TAACCAGGTA TTTACTAAAG
  R
  AACCCTGGTG GGTTTCTTTA GTAAATAGAC TAGCATTGCA TCAGAGCATT CACCTGGCTC
  CTGTGTTTAG CTCATCTTAA TTAGGGTTAT TCCTATTCTC AGTTGTAAAC ATAGCCTGGC
  TCCTGCCATC TTTTTATGTA TGCATTTTCT TTGTTTGGTG TAAGAACCAG TGTACCTTGG
  CAAATGTATT CGCCTAGCCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146765714	ENSMUSSNP1178612	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49551441					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:8515549 () rs orientation: forward

Symbol	Name	Function Class
Rr229180	regulatory region 229180	1252 bp proximal
Rr384116	regulatory region 384116	within coordinates