rs49556067 SNP Detail

Summary

• ID
  rs49556067
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30842138 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGAGGCCC CTCAGCATCC
  ACCTGCGGCT CGACTCACTG TGGTCTCCCA GCGGAAGATG TTGCTGTAGA AACAGATCCA
  GTTCTCAGAG AGGTAGAGGC GGCCCTGGAG GAGGATCTCC CTCTGCAGGG CGCAGGAGTA
  ATCTGAGAGT GGCAGAGGGA GAGATGGGCA GACACGGTGA GTCACGTGAT CTGTCCCGGC
  R
  CGGTAGCCCA CAAACCAGCA GGGAGGCAGG AAAAGAAGCC AGAAGCTCCC GTCCAGGTCA
  CTTAGGGAGG CTGGGGGCAT GGACACTCAC CCACGATGAG GCGCTCTGCT TCAGGAAGTT
  TGCTGAACAG TTTCCGGAAG TCCTCGTTGC GTTGTTTGTA TGTGGGACAC AGCATCTGTG
  AAGAGGTTTG GGGCACGGGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss148700752	ENSMUSSNP4950759	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
ss322139672	CHEV_7_31927732	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs49556067					SNP	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30842138 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18838	CpG island 18838	within coordinates
Gramd1a	GRAM domain containing 1A	within coordinates
Tssr71945	transcription start site region 71945	81 bp upstream