rs49582018 SNP Detail

Summary

• ID
  rs49582018
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:142370241 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGGAAAGGAG GGTTTTTCAA AAAAAGCCTG TTATTAAGAA
  AAATCAGTAA AAAACAAACC ATTAGGTTGC TATGACAAGC CTTTCCTCGT CATTGTTGCT
  R
  CTCATGCCGC TGAAGTGTAC AATGGGCTGC CTATGGGGCA CTGGGGGCCT GGGAGCCGCT
  CTGTCTGTGG GAAGTGATGG AGGGGCTGAA GTTGCAACT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss136016622	ENSMUSSNP2574993	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs49582018					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:142370241 () rs orientation: forward

Symbol	Name	Function Class
Gbp2-ps	guanylate binding protein 2, pseudogene	972 bp downstream
Gm19166	predicted gene, 19166	within coordinates