rs49591426 SNP Detail

Summary

• ID
  rs49591426
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:173151434 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGGCAAGATA AATTTGGAAA GTGATTATTT CGATTACCTC
  CCTCTATTAT TAACACTAAT TACAAGAAAG AACTTTAAAA ACATGTACAT AGATTTCTTT
  A
  CTTTTTTTGT TCTTTTGTTT GTTTGTTTTC TAATAAGGCT TCTTTCTTGG ATCTTTCAAC
  AGCAAACTTT CAAACCCACC CTGGGTCAGG ACAAAGTGG                       
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146220164	ENSMUSSNP7128687	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49591426					SNP	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:173151434 () rs orientation: forward

Symbol	Name	Function Class
Rr423668	regulatory region 423668	1775 bp distal
Rr423669	regulatory region 423669	39 bp proximal
Rr423670	regulatory region 423670	118 bp proximal
Rr423671	regulatory region 423671	1592 bp proximal