rs49592663 SNP Detail

Summary

• ID
  rs49592663
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101128933 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGGAGGGAG AAGTCCATCT
  TTTTGTTTCC GAATAAGTCA TTGGCCACAC GCCACACAAA CAACAAATGA AAGCATGGCA
  GGTGTGGGAA TGAGGTACAC AGGGAGCACG TGCAGCACCC CCCAGGGAGC CACACAGTAT
  GCCCACTTCT GCTTGGGGTG ATGCAAGATT CTGCTTTTCC AGCATGAGGC AGCCAGTGAC
  R
  TGAGGGAGGC ACCAGGAATG CAGGGACTGG TAGAGGCCTG CATGGGAAAG CATTGTGTGT
  TACCAATGAG TGATCTGAGT GATCAATGAG TGGGCTGAGT GATCTGTGGT ATTAAAGCAC
  CCATGCCTTT GTTTTGCAGA CACTAGCAGG GCTGAACCAT GTGGCAGATA ATAAGGGAAA
  TTGTCATCAA AGGACTTAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss135545524	ENSMUSSNP4233361	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs49592663					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101128933 () rs orientation: forward

Symbol	Name	Function Class
Gm65590	predicted gene, 65590	within coordinates
Rr581978	regulatory region 581978	1519 bp distal