rs49595337 SNP Detail

Summary

• ID
  rs49595337
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr5:97201633 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATCCCAGCA ACCACGCGGT
  GGCTCACAAC CTTCCGTAAC AAAATCTGAT GCCCTCTTCT GGAGTGTCTG AGGACGGCTA
  CAGTGTACTT ACATATAATA AATAAATAAA TCTTAAAAAA AAACAAAAAA CAAAACCAAA
  AAAACAAAAG GTGTGGTCAA ATAGTATGCA GATACTAAGT CCAGTGTTAA ATTAAAAAAA
  G
  GGGGGGGCTT TGAAGTGTAA ATAGCAGAGG CATTGTAAAG GGAGAGACCT GACTTCAGTT
  ACACTTATCA GTAGCTGAGT TTATATCTTT ATGGTGGCCT CTTGTTCTCC TGCTGTAAAA
  TTATGGTAGC AATTATAATG ATTAATGTGT AGTCCAGTAG CCGAGGCTAG GCCAAGTAAG
  ACACTCATTT GGGGATGACT                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss148886264	ENSMUSSNP3180298	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs49595337					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:97201633 () rs orientation: forward

Symbol	Name	Function Class
Bmp2k	BMP2 inducible kinase	Intron
Rr399178	regulatory region 399178	1946 bp upstream
Rr615014	regulatory region 615014	1897 bp proximal