rs49615349 SNP Detail

Summary

• ID
  rs49615349
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:51743339 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTGGTAATA TTGTATAATA
  GCTATCTTAC AGAGATGTCA AAATTGAAGA GAGAGGAAAG AAGATCTCCT GGAGCCAGAT
  CCTTCCTGGA CATTGGCTAA GAGTGTACAG TCGCGTCTCC AAACTTCAGA GTAGAATGAT
  TGGAAAGTGT GAACACATGG GAAACTGGCC AGACTCTCTG AGGTGATAAT TTGACAAGCT
  K
  AAGAATGTGG CTTGTCCATC AACCAGGGAG TACACATGGC TCCCTGCATA TGTAGCAGAG
  GATGCTTGTC AGGCATCAAT GGGAGGAGAG GTCTTTGGTC CTATGAAGTC TTGATAGATG
  CCCCAGTGTA GGGGAATTGA AGGTGGGGAA GTGGGAGTGG GTGGGTGGGT GGAAGAACAA
  CCTCATAGAA GCAGGGGGAG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss137724527	ENSMUSSNP1462147	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49615349					SNP	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:51743339 () rs orientation: forward

Symbol	Name	Function Class
Ap4s1	adaptor-related protein complex AP-4, sigma 1	within coordinates