rs49616836 SNP Detail

Summary

• ID
  rs49616836
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:116208278 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGTCTAGTT CAAACAAAAT
  AATGAAAGTG CCCTGGGGTG ACCTGGCACA GAGCTTCATC TCCCACAACC CACTTGAATC
  ACTCTCTCAT GCTGCCTGAG AGAAGCAAAC CCTGTAAGGA GACTACTGGG CTCTTGAGTT
  CAAGTGTGTG TGTTTGCCAG TTATCTCAAG TAAGCTGAAA AAAAAATGAG TAACAATCAC
  T
  ATGGAGATCA AAGTCCAACT ATACACTGCC AAAGCCTAAG AGGTCAAAGC GGAAGGTATT
  TAAACAAATA TGAAAGTAAA ATTGGGTGGA AGTGGATCAC GTGATTTAAG AATGGGCGGT
  GAGATGTTGA GCATAGTGAC TCACATCTGC AATCTCTGCA CCTGAGAGGC TCACAAAGGA
  GGATTACCAA GAATACAAGA                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss135669686	ENSMUSSNP1011457	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	A/J
rs49616836					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:116208278 () rs orientation: forward

Symbol	Name	Function Class
Cdc14a	CDC14 cell division cycle 14A	within coordinates
Rr70202	regulatory region 70202	1078 bp distal
Rr78757	regulatory region 78757	within coordinates