rs49619514 SNP Detail

Summary

• ID
  rs49619514
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:122797866 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTATATTTC ACATTTGCAA
  ATTCCATGGA AAAATACCAC AGTTTTTCTG CTTTTCTTAA GAGACTCTTC TTTTTCTCTG
  GACTCTGAAA AACTCTAGCT GCTTTTCAGG TCAGTGAAAA ACCCCATTCA AAATGCCTTT
  TGAATTTTAA ATTGCGTAGC AACCAGAGAG AAATTTTGGC ATTTCTGAGG TGTCAGCTGA
  S
  TATGAGTTCA TAGACATTTC CAGGAATGGA AGAAACCTAA TATTGAATAG AGGGTTGTTT
  CTTCATGTCC TACATAATCT TAAGAAAAGT CACTTAAGAG TCTCTTAAAT GAAAAATGTT
  TATGAGATTA GGGAGTAATG CTTTATAATT GACACAGTTA ATTGCTGTGT TTTTAGGGAC
  TGAAGGAAAA ATATCTATGA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60443524	NES15944085	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	C	G	G	G	G	G	G	C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs49619514					SNP	G	G	G	G	G	G	C	G	G	G	G	G	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60443524	NES15944085	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:122797866 () rs orientation: forward

Symbol	Name	Function Class
Myoz2	myozenin 2	1989 bp downstream