rs49623696 SNP Detail

Summary

• ID
  rs49623696
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:164475140 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCCAACCTC CATGTGCATA
  AATAACAAAT ATAAAAAAGA CCAGTACTTA AATTTTAATA AATGAATTTT GTATATATTT
  TATTTTACTG TTAGTTTAAT CACATCATGG CCAGTTTAAT ATAAATCTAT TAGCACTGGT
  TGAGACATTT TTTTAAATGT CTGTATGCTG ATTTATTATT TTTTTGTTAT TGGAGAAAAT
  W
  TAAATTATCT GCTGATCAGT CTATATTATC TGCTCTAATG TCAAGCCAGG TAACTCTAGA
  GCAGTGGCTC CTAACCTTTT TAACCCTCCA TCCCTTTAAT TCAGTTCCTC ATGTTATGCT
  GACCCCCAAC CATAAAATTA TTTCATTGCT ACTTCATAAC TATAATTTTG CTAGTTATGG
  GTTGTAATGG AAACATCTGT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148229572	ENSMUSSNP2209650	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49623696					SNP	A	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:164475140 () rs orientation: forward

Symbol	Name	Function Class
Wfdc16	WAP four-disulfide core domain 16	1487 bp downstream