rs49627938 SNP Detail

Summary

• ID
  rs49627938
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:27722389 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACACG ACACGGCAGT AAGAAACCCA
  S
  GAAGGCTTAT GTGACTGTGG CCCGG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss148886318	ENSMUSSNP2946994	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs49627938					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:27722389 () rs orientation: forward

Symbol	Name	Function Class
Adrb3	adrenergic receptor, beta 3	1556 bp upstream
Gm45470	predicted gene 45470	within coordinates
Gm63998	predicted gene, 63998	1020 bp downstream
Rr381848	regulatory region 381848	1545 bp upstream
Tssr80798	transcription start site region 80798	1514 bp upstream