rs49635960 SNP Detail

Summary

• ID
  rs49635960
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:29192105 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCAGTGGACA TGTGGAGTGC ATCTTCTCTT CTTTGGCCTC
  AGTGCGACTC ATCCTGCAGC TCTGCATACT ACAGGTGTGT GTTCGCAAGG TCAGCCAAGG
  T
  CAGAAAACCA TCTGGTTTAA CGAGGCTGTG GCTGTAAGCA GTTTGGTACA GTGCCTGACA
  TGCCTGCCGC ACCCTGGGGA GAGGATGCTA CTGTTGCCG                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss137517959	ENSMUSSNP3625931	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T
ss323976329	CHEV_12_29826971	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs49635960					SNP	T	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:29192105 () rs orientation: forward

Symbol	Name	Function Class
Gm31333	predicted gene, 31333	within coordinates
Rr464389	regulatory region 464389	167 bp distal
Rr464390	regulatory region 464390	within coordinates