rs49637429 SNP Detail

Summary

• ID
  rs49637429
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:32449974 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGTAGTAAC CTTTCTCACT
  CTGATCCCCA ATTCAAAAAG AGTAAGTGGG ATAAGGATTG TCCACTCCCA TTGCAGTGAC
  CTCCCACCCT CAAACAGAAA CAAAACAAAA ACGTCAATCA ATCAATCAAT CAATCAGTCA
  ATAGGAAAAT GAACAAGACT CATTTCCTTG CTGCCCCTGA AGCAAGGAAA TGAGTCTTAG
  K
  GATTTCCCTT ATAAGTATGG GGGTAACCTA TTTAGTCCCT TGGTGAATTC TCCCTTTAAT
  GTCATCCTTA CTAGGCCTCA ACTATCTATG GTCCACAATA TCACTACTGC CATCCTTGTT
  ACCTTCAGAC TTTTTACTTG CTATATCTGC TAAAAGCACA CACACAGAGT GACAGAGACA
  GCTGCAAATC TCCTACCCAT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	MSM/Ms
ss145472280	ENSMUSSNP6485197	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	MSM/Ms
rs49637429					SNP	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:32449974 () rs orientation: forward

Symbol	Name	Function Class
Brd4	bromodomain containing 4	within coordinates
Tssr147356	transcription start site region 147356	1532 bp upstream
Tssr147357	transcription start site region 147357	1385 bp upstream
Tssr147358	transcription start site region 147358	1346 bp upstream