rs49646153 SNP Detail

Summary

• ID
  rs49646153
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:111861671 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAATGAGGC AGAGATAGAA
  TATGCCCAAC TCTCAGGAGA AAAGCTATTT AAGTGCAGTG CAGGGAGAGA GTTCAGTTTG
  TCAATGAGTT GGCAAAAAGT CAGTTGGGAG TTAATGTAGT GCTTTGCAGT GGAGTTGAGT
  TGACTTCCTT CATGAGTTCA CACAGTTCAG TGCAGGTAGG AAACAGTTGA AGCCAAAGAC
  Y
  AAAAAGCCAG AAGATTAGGA CAAATTGACA TTTGAGGCCA AGCAGAGCAA TTCAGTGGAA
  AGCTGAGAGA AGCCAGATTG AATGAATTAG CTTGGAGAGG AGTTTGAGCC AGAACAGCTG
  AGTTGAACCA GCTAGTCCCA GTTCAGAAAG AAATATAAAG AGTAAGCCTA TTCAGCAGTA
  AGCCTTGGAG ACAGCAATTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

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SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss134277803	ENSMUSSNP2031171	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
ss325913372	CHEV_X_110065583	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs49646153					SNP	C	C	T	C	T