rs49651277 SNP Detail

Summary

• ID
  rs49651277
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:12503097 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                      A CGCTGGATCC TTCTCAACAG TCTGTTTTAC GGGAACCTTT
  ATGACCGTGA CCCGCAGTTC TGGTTCCGGA ATGAGGAATC TTCCTTGCGC CGGTGATGGT
  W
  AACTCCCGTC CCGAGTTTTC TTGTCCCGGG TTTCCGGCAC CAACTCTTAC ACGCGTTCTC
  ACGACCGGCC AGGAAAGACA CAACAAACCA GAATCTTCTG C                    
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss139577495	ENSMUSSNP4286514	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49651277					SNP	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:12503097 () rs orientation: reverse

Symbol	Name	Function Class
Map3k4	mitogen-activated protein kinase kinase kinase 4	within coordinates
Rr392297	regulatory region 392297	within coordinates