rs49652766 SNP Detail

Summary

• ID
  rs49652766
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:113136563 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCTCA GCTTAAAACC TGCTTACAGT
  R
  CTCTTCAAAG AGCGCTGCGT GTTCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss132828900	ENSMUSSNP6998198	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
ss323856638	CHEV_11_113107051	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs49652766					SNP	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:113136563 () rs orientation: forward

Symbol	Name	Function Class
D11Dcr27	DNA Segment, Chr 11, Derry C. Roopenian 27	1114 bp proximal
D11Mit168	DNA segment, Chr 11, Massachusetts Institute of Technology 168	1111 bp proximal
Slc39a11	solute carrier family 39 (metal ion transporter), member 11	within coordinates