rs49667313 SNP Detail

Summary

• ID
  rs49667313
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:34608730 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCTGTGCTAG CTAGGAAGCA GAGAGAGAGA GAGAGAGAGA
  GAGAGAGAGA GAGAGAGAGA GAGAGAGGAA GAAGTTGTGT TCCCATCTCT TCCCAGGGTA
  Y
  GTGTCCTAAC CTTCTCTCCA GTAGACCCCA CCTCATGCAA GTTTATCACA TTCTGACAAT
  GCACAGATTT GGGTCTGTGT TCTTAAGGCT TTCATGTGC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss148891506	ENSMUSSNP6703811	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs49667313					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:34608730 () rs orientation: forward

Symbol	Name	Function Class
Gm19225	predicted gene, 19225	1568 bp upstream