rs49674391 SNP Detail

Summary

• ID
  rs49674391
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:84044948 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAATTTATTG GGGCACTGGC ATTTATATAC CCTCTAAAAA
  TTCCCAGAAT TCCATACGAA AACAGAAACT AACTGCAACT GGCAAAACCA CGCCTCTGCT
  A
  GAGCACGAAG CAAATCATAG TCAGCTGCTG GGACCCCACA CCTGGGGTTA AAATGAAAAC
  ATATTCTTAT AATAGTTCTG TATTTTTTAA AGAAACAAA                       
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135420925	ENSMUSSNP4678571	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
ss320822427	CHEV_3_83941563	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs49674391					SNP	A	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:84044948 () rs orientation: forward

Symbol	Name	Function Class
Mnd1	meiotic nuclear divisions 1	Intron
Rr578991	regulatory region 578991	1605 bp distal
Rr578992	regulatory region 578992	835 bp distal
Rr578993	regulatory region 578993	914 bp proximal