rs49675845 SNP Detail

Summary

• ID
  rs49675845
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:14910663 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AACAC GACTAAGGAA ACTTGGAGAG
  R
  AAAGGGTTTA TTTGACTTAC ATATC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss148649027	ENSMUSSNP355304	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs49675845					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:14910663 () rs orientation: forward

Symbol	Name	Function Class
Rr408018	regulatory region 408018	1226 bp proximal
Rr408019	regulatory region 408019	1721 bp proximal
Smt3h2-ps4	SMT3 suppressor of mif two 3 homolog 2, pseudogene 4 (S. cerevisiae)	283 bp upstream