rs49688844 SNP Detail

Summary

• ID
  rs49688844
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:66103071 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTGCCAGTA TGTATGCTGT
  ATGTCTAGAC ACCTGTGTGT CTGGTGCCCT CAGAGCTTGG AATTGGGAAT CAGATCCTTG
  GAACTGGAGT TACCGATGGT TGAGTAGCCA TGTGAGTCCT GGGAAACAAA CCCAGGTCCT
  CTACAAGAGC AACCAGTATG CTTATCCACT GAGCCATCTC TCTATCCCTA ACATGTCCTT
  Y
  TTAAAAAACA TACTACATTG CTGAGAGTGG TGGTACATGC CTTTAATCCC AGCACTTAGG
  AGGCAGAGGC AGTTGGACTA TTTCTGTGAG ACTGAGGCCA GACTGATTTA CAGAGTGAGT
  TCTAGGACAG TCAAGGCTAC ACAAAGAGAC CCTGTCTCGA ATAAAACAAC AAAAAAATTA
  CATTTGTGTG TGTGTGTGTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss136573326	ENSMUSSNP6414069	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs49688844					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:66103071 () rs orientation: forward

Symbol	Name	Function Class
Dapk2	death-associated protein kinase 2	within coordinates
Rr210270	regulatory region 210270	672 bp distal
Rr210271	regulatory region 210271	731 bp proximal