rs49691477 SNP Detail

Summary

• ID
  rs49691477
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:57547287 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATTATGCCT ATGGCATTAG
  GTTCCATAGT GAAGCAGAAG CAATAGAGTG CAGCCATGAT ACAAGGGGCT TCATTGGATT
  GTCTTACATG ATAGTGAATA GTCCAAGAGT CTGCCCAATC CAAGAAGCTG GATACAGCAG
  TCATAATCTG TGCTTAAGGC TGGGAGCTCC CTGGAGAACT GCTTGCACCG AATCCACCTG
  R
  AGGGGCTGAC AAAGATGGAG TCTGACACGG GCTAACGGGG ACAGCAGTCA CAGAAAGAAA
  AGGGTGCGCA GGTGCTCACA CACTAGCTTC ATTTTCATTT AGGCTACCTA TTGGAAGGTG
  CCACCCACAT GCAAGGCAGG TTCCTCAGTG ATTGTGTGAT GTGTCAATTC TCTCCAAAAA
  TGGCCCCAAA AGCACACTAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss147978607	ENSMUSSNP6723102	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs49691477					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:57547287 () rs orientation: forward

Symbol	Name	Function Class
D15Dcr1	DNA Segment, Chr 15, Derry C. Roopenian 1	974 bp proximal