rs49698383 SNP Detail

Summary

• ID
  rs49698383
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:39676996 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T CATTTCTTCT TCTTTTTTTT TAACTGAAAG GGAAAAACTA
  TAAAATGTAG ACCTTGAGAT GGGTCCAAGA GCTGGTAAAC AATGTTCAGA GGGGAGAACA
  Y
  ACACACACAC ACACACACAC ACACACACAC ACTCCTAAAA GCACATATTT ACTTTTAGTA
  GTCCAAGGCT ACTAAAACCT GGTTCATTCA CTCAGCAAAT A                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147674389	ENSMUSSNP1154013	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49698383					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:39676996 () rs orientation: forward

Symbol	Name	Function Class
Dpys	dihydropyrimidinase	within coordinates
Gm16291	predicted gene 16291	1223 bp downstream
Gm62327	predicted gene, 62327	within coordinates
Rr302762	regulatory region 302762	805 bp proximal
Rr309646	regulatory region 309646	1688 bp distal