rs49701953 SNP Detail

Summary

• ID
  rs49701953
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:75828199 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGGACCAGC CACATGAAGA
  TGGCGGTACA GTATAGAATA GAGTTTATTC AGGGCATGGG GAGGGGAGTT AGGAGGGTAG
  TAGAGGCAGA GAATGGCAGA GAGAAGTAGA GGAGAAGAAT AGAGACTGGC CATGAGCATG
  TGGAGAGAGG GGGAAGGGGG GGGGCAAGCA GCCCCTTTTA TAGTGAGTCA GGCCTACCTG
  A
  CTGTTGCCAG GTAACTGTGG GGTGGAGTTT AGATAGAACG CTAACAGTCA TCTTCACCTC
  TTACATGACA GAAGCCAGCT AGATGATTTA AAATTTCACA GACTCTTGAG AAGGTATAAT
  TAACCTGATT GCCCACTTTC CCTTTCTGCC CCCATTTAGT CTTTAGTGGT CCTGAGCTAA
  CCTATCAGTG GTGTGAAGAC                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss145965541	ENSMUSSNP1781258	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs49701953					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:75828199 () rs orientation: forward

Symbol	Name	Function Class
Rasgrp3	RAS, guanyl releasing protein 3	within coordinates
Rr531054	regulatory region 531054	1485 bp proximal
Tssr145886	transcription start site region 145886	577 bp downstream