rs49702184 SNP Detail

Summary

• ID
  rs49702184
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:34877342 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAGAATTCA GCAAAGGGAT
  CAACGCCTGC ACTGTCAGAG AAGACTATAT GATGAAAAAA AGTAAGATGA AGAAACCTGT
  TTGAAAAGGC CCAGAGAAAA ATGTGCTACT GTCAAAAGCA GCCTGAGTGA TGCGCAGTGG
  GTGGTGCACT GCAGGTGGTA CTCTGCAGGT GATACATTGC AGGTGGTGCA CTGCAGGTGG
  Y
  ACTCTGCAGG TGATACATTG CAGGTGGTGC TCTGCAGGTG ATACTCCACA GACAGCTTTC
  TACTCCCTGT GCTTTGCCAA CTCTACCATG AGCAAAAACC CAATGCCAAC AGACCAAGAA
  CTAGGCCAAA CTCAATACAA ATACCTAACA TTTCACCTCT TAAACAGAAA ATTAAATTAA
  ATTTTTAAAA TGATTTATTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss147562964	ENSMUSSNP3072257	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs49702184					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:34877342 () rs orientation: forward

Symbol	Name	Function Class
Stk3	serine/threonine kinase 3	within coordinates
Tssr133982	transcription start site region 133982	968 bp upstream
Tssr133983	transcription start site region 133983	855 bp upstream
Tssr133984	transcription start site region 133984	1626 bp downstream