rs49710325 SNP Detail

Summary

• ID
  rs49710325
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:95921890 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGAG CTCCACAGAA TACGTTAATG
  Y
  CATAGATCGT GTGGATGGCT GTGGT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss134250615	ENSMUSSNP3316994	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
ss325905530	CHEV_X_94073623	CHEVERUD	SCREENING_POP	f	SNP			T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs49710325					SNP	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:95921890 () rs orientation: forward

Symbol	Name	Function Class
Rr5036	regulatory region 5036	1690 bp distal
Rr5037	regulatory region 5037	511 bp proximal
Rr8052	regulatory region 8052	460 bp proximal