rs49717149 SNP Detail

Summary

• ID
  rs49717149
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:106094045 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAGACCCGT CACCAAGTCA
  TCATGTTAGC TTATCATTTC ATTTATTCCA ATAGTGTTAC CAGCTAATTT GGGTGTTTCA
  TGGCCACATC AAATTCATCT CTGCACATTT GGTGTCCCCA ACAAGATAGG TTCGCAGTGG
  CTGCACATAG AAACTTCTTT CTACTTTTAC AGTGATGCAA AACAGATAAT GGAGGCTTCG
  M
  AGTCCAGTTT TCAGTTAGTG TGTAAGTAGG CACAATGAAA TCTCATCATT TAATACCTAC
  TGCTACGGAG GACAGGCATT CCCAGATTCA TCACAAAGTC ACCAAGGCTG ACTGGCACAC
  GAGTCGTTGT ACTCTCAAAA CCTTTCCACT CTCTGAGATG TTAAAGGCTA GTCATAACTA
  ATGGACTCTT GTCATGTTTC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss146767794	ENSMUSSNP6724752	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs49717149					SNP	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:106094045 () rs orientation: forward

Symbol	Name	Function Class
Gm48970	predicted gene, 48970	within coordinates
Gm63380	predicted gene, 63380	1026 bp downstream
Rr390111	regulatory region 390111	1605 bp upstream