rs49723822 SNP Detail

Summary

• ID
  rs49723822
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:70314803 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACAGC TTATTTCTTC TGTTGGCTTG
  K
  TCTTGAATGC TGACACTCAC CTATG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss136607538	ENSMUSSNP5752636	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss322999744	CHEV_9_70255328	CHEVERUD	SCREENING_POP	f	SNP			T	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs49723822					SNP	G	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:70314803 () rs orientation: forward

Symbol	Name	Function Class
Ccnb2	cyclin B2	171 bp downstream
Mir5626	microRNA 5626	1768 bp upstream
Rr197017	regulatory region 197017	1198 bp proximal
Rr204787	regulatory region 204787	within coordinates
Rr204788	regulatory region 204788	1197 bp proximal