rs49729437 SNP Detail

Summary

• ID
  rs49729437
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:144149001 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAGTTAGCC ATCACAGCTG
  ACCATCTGAG TTTGGACACC TGAACTCACA TGGTGGAAGA ACATAAAGAA TTGGTTCCCA
  TTGGTCCTCT GACCTCCAAA CTCACACATG GCATGCATAG GCAGACATCC ACACATATAC
  CTTATGTGCG CTAAATAAAT GTTGAGCGGG AACATACTGG GGGGTGGGGG GAGAGGCACA
  G
  GGTGGTGTCA AGAGGACACT TGGCATCATT GGCCTACCCC TTCCTATCAC ATGTGTACGA
  TCACACATGC ACACACACAC ACACACAGAT GACTAGCTGT GTCATTTTTT TTTTCATTTT
  GTTTTTTAAA TGAAACATTG CAGGCAGTGG TATTCTGTAA TCCCAGTTAG AGTGTGAGAG
  CCACCTGGGC TACCGGGTAC                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147790744	ENSMUSSNP5154081	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs49729437					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:144149001 () rs orientation: forward

Symbol	Name	Function Class
Ovol2	ovo like zinc finger 2	Intron
Rr566440	regulatory region 566440	983 bp distal
Rr566441	regulatory region 566441	1157 bp proximal