rs49730007 SNP Detail

Summary

• ID
  rs49730007
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:108064247 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGCGTTTAA AGCATCATCT
  CTAGGGAAAA GAGGGCACAA GGTGACGTGA CCTTCTCCAG ATCAAATACA GCCAGAGCCA
  ATATGAAAAC CTCATTCAGT TTGAATATAA GGTGTTTTGA ATATAGGATC TTTCCTGGTC
  CCATGCCTTT CTGGGGCCCT GATGTGGCAC TCAGGACAAT AGCACAGATT GATATAGGAC
  M
  TAGAACCCCT TCCAGGGATT CAGAGAGAGA GAGAGCAGAC ACCATTGTTC TAACAAAACT
  ACAGACAGAA AGCACTAGAC TGGGTTCAGC TTTGGGTGTG CTCGCCGGTC GAAAGGAAGA
  CTCAGCTTCT GAGGTCGATG TGCATTAGTT TTTCCATATA TGCAAAAGTC AAAATTCCTC
  ACTCCCCAGC GTGATACAAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss135585479	ENSMUSSNP4737338	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs49730007					SNP	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:108064247 () rs orientation: forward

Symbol	Name	Function Class
Rr583153	regulatory region 583153	1894 bp distal
Rr583154	regulatory region 583154	600 bp proximal
Rr583155	regulatory region 583155	1230 bp proximal