rs49733434 SNP Detail

Summary

• ID
  rs49733434
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:40831040 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G AGTGAACCAG TACGAAAGCC TATGGAAAAA GGTAGCTGTT
  GCCTGTGCTT GGGTTCTACT AGCTGGGCTG CTTTGTCTGA CCTCAGTGGG AGAGGAAATG
  Y
  CTAGCCTCCC AGAGACTTGA TGCTCCAGGT TGGGGGAGGG GTACACCCAG GGGGGACCCT
  ACCCTCCCAG AGGAGAAGAA AAGAGGGGAC TGTGAGAGGA G                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss145609486	ENSMUSSNP108533	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs49733434					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:40831040 () rs orientation: forward

Symbol	Name	Function Class
Esp8	exocrine gland secreted peptide 8	within coordinates
Gm49847	predicted gene, 49847	8 bp downstream
Rr337560	regulatory region 337560	1300 bp distal
Rr392616	regulatory region 392616	745 bp downstream
Tssr144637	transcription start site region 144637	121 bp downstream
Tssr144638	transcription start site region 144638	105 bp downstream