rs49734377 SNP Detail

Summary

• ID
  rs49734377
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:14388908 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAAGCTAGAA ATATGCTTTG TCATTGCAGA TTGAAAAAAA
  AACTGTATTG TAAATTCGTC CTTCTCAGTA TACCAAATTT ACAGTCTAAA GGCATATAAG
  K
  CATTGTCTGT GTGCCAGGCC CTAAATGCAC TCACTACTAT GAGTATTGGT CCATCAAAAA
  AGTCTGGAGC TAAGAGGAAA GGATAGACCA TCCAGAGAC                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss52149212	NES15240929	PERLEGEN	MM_PANEL2	f	SNP	T		T	T	G		T	T	T	T	T
ss146857340	ENSMUSSNP5938150	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	G			G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs49734377					SNP	T	T	?	T	G	G	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52149212	NES15240929	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:14388908 () rs orientation: forward

Symbol	Name	Function Class
Adgrg6	adhesion G protein-coupled receptor G6	within coordinates
Rr218615	regulatory region 218615	308 bp distal