rs49735652 SNP Detail

Summary

• ID
  rs49735652
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:6570997 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGCA TATGCTTGAA ATATTTTATA
  A
  TAAAATGTGG GGGGGGAGCT GAAAT                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss147046308	ENSMUSSNP2389166	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs49735652					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:6570997 () rs orientation: forward

Symbol	Name	Function Class
Fyb1	FYN binding protein 1	within coordinates
Gm62041	predicted gene, 62041	1085 bp downstream
Gm62055	predicted gene, 62055	484 bp downstream
Tssr130496	transcription start site region 130496	1246 bp downstream
Tssr130497	transcription start site region 130497	1204 bp downstream
Tssr130498	transcription start site region 130498	1187 bp downstream
Tssr130499	transcription start site region 130499	1163 bp downstream