rs49737436 SNP Detail

Summary

• ID
  rs49737436
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:70347008 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTAGGTATG TTAGTGTGGG
  GGCGATTAGA AGGTAAATAT ATCCAGCAAG ATAAAATGAA AAAGAATCCC ATTTCATGGG
  ATTAAAAAAA ATTAATAACT GCTATGGAAC ATTCCTAAGA CATATAGAGC TAAAATTTTT
  ACATTTAAAT ATTACTTTGG GCTCTTAATA GCCAACAAAA TAAATTTATA GGCCCTATTT
  W
  AAAAAGAAAG GAGGAGGGCT GGAGAGATGG CTCAGTGGGT AAGAACACTG ACTGCTCTTC
  CCAAGGTCCT GAGTTCAAAT CCCAGCAACC ACATGGTGGC TCACAACCAC CCATAATAAA
  ATCTGACGCC CTCTTCTGGT GCATCTGAGG ACAGCCACAC TTATGTATAA TAATAAATAA
  ATCTTTAAAA ACAAAAGAAA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss139680821	ENSMUSSNP3314485	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49737436					SNP	T	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:70347008 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Bin3	bridging integrator 3			Intron
				Noncoding-Transcript-Variant
Rr494843	regulatory region 494843			123 bp proximal
Rr494844	regulatory region 494844			1412 bp proximal
Rr494845	regulatory region 494845			1506 bp proximal