rs49750978 SNP Detail

Summary

• ID
  rs49750978
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:52029365 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGGAAGTTTC TTTGTTTTTG
  GGTATTTAGA TGAGAATAGG GTATTGAAAC CACCTTTTGT CGTATTAGGA CCTGAGTTTT
  TATTAGTGTT AACATACATT GAGAGCCCCA ACAGTGTATG TGTACTTATA ATTGTTACAT
  GAATTCCTTT TTTATTAATG CAAACAAGCT TCTTTATTTC TCCTTAGTAA CTCTGGCCTG
  A
  CCTGTACTTT ATCAGGTCTC AGAGTAGCCA TGTTGGCTTG TTTTCAGTGT TTCTTCACTT
  GATAGATTGT TTTCATCCTT CCACCTCCAG TGTGGGTTCT CTGGAGAAAT TAAATAGATC
  TAGTTTTCTT AATCTAATCA GCTATTTCTT TCTGTTGGTG TGCCATTAAA ATGTAAGGCC
  ATTTAAATGT AAGGTCATTT                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss137728937	ENSMUSSNP5968821	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	A/J
rs49750978					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:52029365 () rs orientation: forward

Symbol	Name	Function Class
Gm60186	predicted gene, 60186	1148 bp downstream
Rr387211	regulatory region 387211	711 bp upstream