rs49759179 SNP Detail

Summary

• ID
  rs49759179
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:55204669 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCCCT CCTCTCTCTC CTTACTCTGT
  A
  CAGATACTGT CTGTAGTCTC TGTTG                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss139574322	ENSMUSSNP1951493	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
ss324641221	CHEV_14_55586049	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs49759179					SNP	A	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:55204669 () rs orientation: forward

Symbol	Name	Function Class
Mhrt	myosin heavy chain associated RNA transcript	1546 bp upstream
Myh6	myosin, heavy polypeptide 6, cardiac muscle, alpha	285 bp upstream
Rr407057	regulatory region 407057	within coordinates
Rr492378	regulatory region 492378	618 bp distal
Rr492379	regulatory region 492379	81 bp distal
Rr492380	regulatory region 492380	1023 bp proximal
Tssr4419	transcription start site region 4419	910 bp upstream
Tssr4420	transcription start site region 4420	797 bp upstream
Tssr4421	transcription start site region 4421	791 bp upstream
Tssr4422	transcription start site region 4422	739 bp upstream
Tssr4423	transcription start site region 4423	713 bp upstream
Tssr4424	transcription start site region 4424	675 bp upstream
Tssr4425	transcription start site region 4425	562 bp upstream
Tssr125718	transcription start site region 125718	1460 bp upstream
Tssr125719	transcription start site region 125719	1539 bp upstream
Tssr125720	transcription start site region 125720	1569 bp upstream
Tssr125721	transcription start site region 125721	1589 bp upstream
Tssr128732	transcription start site region 128732	1916 bp upstream
Tssr128733	transcription start site region 128733	1881 bp upstream
Tssr128734	transcription start site region 128734	1853 bp upstream
Tssr128735	transcription start site region 128735	1810 bp upstream
Tssr128736	transcription start site region 128736	1778 bp upstream
Tssr128737	transcription start site region 128737	1751 bp upstream
Tssr128738	transcription start site region 128738	1739 bp upstream
Tssr128739	transcription start site region 128739	1388 bp upstream
Tssr128740	transcription start site region 128740	1318 bp upstream
Tssr128741	transcription start site region 128741	1245 bp upstream
Tssr128742	transcription start site region 128742	627 bp upstream
Tssr128743	transcription start site region 128743	604 bp upstream
Tssr128744	transcription start site region 128744	275 bp upstream
Tssr128745	transcription start site region 128745	6 bp downstream
Tssr128746	transcription start site region 128746	740 bp downstream
Tssr128747	transcription start site region 128747	769 bp downstream
Tssr128748	transcription start site region 128748	788 bp downstream
Tssr128749	transcription start site region 128749	851 bp downstream
Tssr128750	transcription start site region 128750	870 bp downstream
Tssr128751	transcription start site region 128751	887 bp downstream
Tssr128752	transcription start site region 128752	940 bp downstream
Tssr128753	transcription start site region 128753	1129 bp downstream
Tssr128754	transcription start site region 128754	1208 bp downstream