rs49769147 SNP Detail

Summary

• ID
  rs49769147
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:66811220 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGAAGATG CAGGTCATGG
  TCCCTGCTCT TCTGGGAGCT GCAGTTCTCA CCCTTTGAGG CACATTTCGT TGTTCAGTAC
  TGAGCAGTAA CTGAACCATC ATCACAAACC TCTGACCATT TGAACATTGC TTCTGCACAT
  GAATCTGGCT GGTGAATGCA CATGTGGAGG CCAGAGGTTG ACAGCTGGTG TCTTTCTCAA
  Y
  TGCTCTCTAC TTTATTTAAA GAGGCAGAGT CTCTCACTGA ACCCAGCCTA TCCAGCTTGT
  CCTGAAGGTC CCTGCCCCTG CCTCCAGAAC ACAGGGTTAC GGGCAAGTAC GCACATCCTT
  CAGCTTTTAT GTAGGTGCTG GGAATCTGAA ATCTGGTCCC ACAGCAAGCA ACGAGCCATC
  TCTCCAGCCC ACATACCTTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss136576006	ENSMUSSNP1898805	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
ss322989011	CHEV_9_66751745	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs49769147					SNP	C	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:66811220 () rs orientation: forward

Symbol	Name	Function Class
Rab8b	RAB8B, member RAS oncogene family	within coordinates
Rr196777	regulatory region 196777	1981 bp proximal
Rr201403	regulatory region 201403	within coordinates