rs49771950 SNP Detail

Summary

• ID
  rs49771950
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:33151344 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCTACCTAT ATATGTATTT
  CTGTGTATCC TTTATATCTG TCAGTCTGTT ATCTATCTCC ATCTATCCAT CTACTTACCT
  AACTTTGTAT CTCTTCCTTT ATACCTAGAA AGCTATGTAT CTGTATATCT GAACACTTAA
  TCTTCTGTTT GTTCTATTTC TCTGAAGTAC CCAACTTATT ATAGTCATAT TCTAACAAGA
  G
  GTGCTGAAGG GTTAGGATTT CAATGTCTCT TTTTGGGAGT CACAATTTAG CCCACAGGAG
  AAAGACGCAT TGGTTACTTT TTTTTTTTTT TAAATCACCC TTACAAGGAG GGAAATTTTA
  TTTGGCTCGT GGTTCATTGA GGGGAAGGCA TGATGGCTGG GACAGTCTTG GTCTAGAGCT
  AGGGGACTTG GTAGCATGAT                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss137582061	ENSMUSSNP5776506	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs49771950					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:33151344 () rs orientation: forward

Symbol	Name	Function Class
Gm59430	predicted gene, 59430	1368 bp upstream
Rr464869	regulatory region 464869	878 bp proximal
Rr464870	regulatory region 464870	1379 bp proximal