rs49774121 SNP Detail

Summary

• ID
  rs49774121
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:26319186 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ccgctgagc cacctctcca gctccCCTGT
  ACTGATTCtt aaggttaact gggctgtttg agttggtcga ttaatgcctt tcttcaagtc
  tgaaaaataa aggtatttta accaatactt ttttctgtct cagtctcttt catactctcc
  K
  GGAACTCTAA TTTCCCTTTA GCCCTCTTTC TGCCCTACTA AAGTTACTAC TGGAAGTATG
  TAAAACATGC AGGAATGAGG GCTGCTTCTA TGTAGAAGGT CCAGGGTGTC ACTCCTGCCT
  GCCAGGTCGG GTTACTTGCT GCCAGGCACC                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325339836	CHEV_17_26237157	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs49774121					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:26319186 () rs orientation: forward

Symbol	Name	Function Class
Gm8186	predicted gene 8186	991 bp upstream
Tssr146918	transcription start site region 146918	953 bp upstream