rs49775181 SNP Detail

Summary

• ID
  rs49775181
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:164289759 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTCTGCAGTT GGAGGGCTTG GGAAAAGGCT GTGGACCGGT
  CAACGTGGCT GGACTGTAAG TGGACAAGAG GCAGGGTTGA ATACCCTCAC CATCTATCAA
  R
  AAGGACTCCT GATTAGTCCA CAGGGTGTCA CTCTGCTTTA TAATGGTTGC CTCATGGTTA
  CTAGAGAAAC TACTCTCTGA GAGGGATCCG GTTTCAGAC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss145979008	ENSMUSSNP1374841	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs49775181					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:164289759 () rs orientation: forward

Symbol	Name	Function Class
Gm32391	predicted gene, 32391	within coordinates
Gm70485	predicted gene, 70485	within coordinates
Tssr14749	transcription start site region 14749	1341 bp upstream
Tssr14750	transcription start site region 14750	1319 bp upstream