rs49775830 SNP Detail

Summary

• ID
  rs49775830
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121615012 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CACTCATATA CATAAAAGAA GAAGGAAAGA GGAGGAGGAA
  GAGGAGGAGG AGTTGATGGT GATGATGATG GTGCAGCAAG GCTGGGAAGA TAGCTCAATG
  R
  GTAAAGTGAC TGCTGTAAAG TGTGAGGACG TGAGTTTGAA TCCCCAGACC CAGGTAACAC
  AGCACACGGT AGCATGCCTA TAATCTGAGC ACTCTTACT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135729792	ENSMUSSNP3817063	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
ss320906088	CHEV_3_121524281	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs49775830					SNP	A	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121615012 () rs orientation: forward

Symbol	Name	Function Class
D3Mit347	DNA Segment, Chr 3 Massachusetts Institute of Technology 347	1702 bp proximal
Rr584177	regulatory region 584177	546 bp distal
Rr584178	regulatory region 584178	372 bp proximal