rs49776276 SNP Detail

Summary

• ID
  rs49776276
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:120754946 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    agaagacta atatccaaaa tatataaaga
  actccagacg gtggactcca gaaaatcaaa taaccccact aaaaaatggg tctcagagct
  aaacaaagaa ttctcatctg aggaatactg actggctgag caacacctga aaaaatgctc
  W
  gcatccttaa tcatcatgga aatgcaaatc aaaacaagcc tgagattcca tttcacacca
  gtcagaatgg ctaagttcaa aaattcaggt gacagcagat gctggcattg atgtggagaa
  agatgaacac tcctccattg ttggtgggat                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss134396141	ENSMUSSNP5035297	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
ss325960951	CHEV_X_118958858	CHEVERUD	SCREENING_POP	f	SNP		T	A
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs49776276					SNP	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:120754946 () rs orientation: forward

Symbol	Name	Function Class
Rr395603	regulatory region 395603	764 bp upstream