rs49778758 SNP Detail

Summary

• ID
  rs49778758
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:145286256 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T GACATAGATT ATTTTTCCTG GGCTGCCAGG ATCTTATGGA
  TTCTTTTCTA TGGGTGCTCT GAATTAGTTT GTGGTCCACC ACCCAACAAT TAATCCTCCC
  T
  CTTCCTGCTT TCAACCTGTC TATCTGAACC ATGCTCTGCC TCACCCCATT TCACAACTAA
  TTTTTGTTTA TTGCAAGATT ACACTTCTGT ATGTCCAGAT G                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147865716	ENSMUSSNP14661	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs49778758					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:145286256 () rs orientation: forward

Symbol	Name	Function Class
Gm21978	predicted gene 21978	943 bp upstream
Rr398684	regulatory region 398684	1436 bp downstream