rs49783691 SNP Detail

Summary

• ID
  rs49783691
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:122527295 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACTTAATTT TCTCTGTAGT
  ACTGGTTCTC AACCTTCCTG AAGCCGTGAC CCTCTTTAAT ACAATTCCTC GTGCTGTGGT
  GAGCCCTGAC TGCAAGATTA TTTTCATTTT ACTACTTCAT AACTATAATC TTACTACTCT
  TATGAATCAT AATGTAAATA TTTTTGGAGT GAGGGGCTTG CCAAAGGGGC TGTGACCTAC
  C
  GGTTAAGACC TGCTGCTCTA AGTGGCTGTA CAAGTTAAAC ACTAACAAGT GTTTCCTGAG
  GACGGATTTT AATGCTTTCT GGATATGATA AAGATATAAT AATAATAGTA CTGCTAATAA
  TGCTCATTTA TGACTATGGC TGTAGATGGT TGCTAAGCAC CCGCACGGGT TCTTAATAGA
  AACATCTTTA GTGAAGAGCT                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss147651257	ENSMUSSNP1554410	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	A/J
rs49783691					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:122527295 () rs orientation: forward

Symbol	Name	Function Class
Ppm1h	protein phosphatase 1H (PP2C domain containing)	within coordinates
Rr226290	regulatory region 226290	1107 bp proximal