rs49784807 SNP Detail

Summary

• ID
  rs49784807
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:70118520 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACACACACA AGACCGATTC
  ATTCATTCAT TCATTCATTC ATTTGAGACG GTGTTTCTCT GTGCAGCACT GGCTGTCCTG
  GAACCCACTT TGTCGATCAG GCTGGCCGTG AATCCAAAGA TTTACCTGCC CTGCCTCCCA
  AGTTCTGGGA TCAAAGGCGT GCACCACCAC ATCTGGCTAC AGAACCGATT TATAACTTAG
  R
  GATCTGGTAG ACAGTCGATC AAGGGGAAGA TAGGTTCCTT CGGGTGGGGA CTGGTATGTA
  TTTAGTAAGT CTGGAATGCA TTTGGAATGT TTTCTGGGAA GTCAATTTAG TTCATTTATT
  GATTATCAGA TTCTAGAAGT CCCCTGGCCA GAACAACACA ATTCAGCTAA ACTGGAGAGG
  GTTAGACTTG ATGGCCGTGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss136604714	ENSMUSSNP3296332	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49784807					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:70118520 () rs orientation: forward

Symbol	Name	Function Class
Gm26849	predicted gene, 26849	within coordinates
Gm68934	predicted gene, 68934	90 bp downstream
Myo1e	myosin IE	within coordinates
Rr206677	regulatory region 206677	1719 bp distal
Rr206678	regulatory region 206678	1319 bp distal
Tssr85881	transcription start site region 85881	1973 bp upstream
Tssr90403	transcription start site region 90403	483 bp downstream