rs49787263 SNP Detail

Summary

• ID
  rs49787263
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:100005792 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTAGAAGAC AGACAGAACA
  GCATTCTGTC TCTTACAACT GACAACTTCA TTGCAATCAC CATTAAGTCT AAACATGCAT
  CCTCACATAT ATACAGCTGT CCTGGGGCCA CTGATCATAT ATTGCTTCTC CTATGAAATA
  AGCACGAGTT ACGGCACACC CACCACCAAG CTGAGTTCCT GTCAGTGATT ATCCCATGAA
  W
  CTTTTTTTTT TTTTTTTCGA GAAAGGTCTC ACTGTGCCAG GTTGGCCTGG AACTCAGAGA
  GATCTACCCA CCTCTGCCTC CCAAGTGCTA AGATTAAAGG TGTGCACCAC CATGCCGGGT
  GCAAGAGAAC ATTATTAAAT CTGATATTTC AGGATGCAAT CATGATGGAA GAATTTGCTA
  ACACCGGCTG GAGAAGCCCT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss145079697	ENSMUSSNP1498680	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs49787263					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:100005792 () rs orientation: forward

Symbol	Name	Function Class
Rr269933	regulatory region 269933	392 bp distal