rs49793189 SNP Detail

Summary

• ID
  rs49793189
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:127653115 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTGAAGTAA GATTAAGAGG
  TGGCCTTGTT GGAGGAGGTG TGTTGGGGGT GAGCTCTAAA GTTTCAAAAG CCCGTGCCAG
  GCCCAGTCTC CTCTGTGTCT GCTGCCTGAG ATTCAGATGT AAACCTTTTG CTCAACTACT
  GCTCCCCCAC TGTGCCTGTC TACTTCCCAC CATGATAACC ATGGACCAAC CTTCTAAAAC
  Y
  GTAGGCAAGC ACCGGATTCA ATGTTTTATT TTATAAGAAT TTCCTGGGTC ACAGTGCTTC
  TTCACAGCAG TAGAACAAGA GCCAAGACAG AAATCAACGG GAAACTACAC AAATCCAACC
  CTGGGAGGAT GACAAACAGC AGAGACCCTT CAGGAATGAA GGTATGGGTC CCTCCTCCAG
  GGGAAGAACC AAGATCTGCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135873308	ENSMUSSNP4580073	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49793189					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127653115 () rs orientation: forward

Symbol	Name	Function Class
Gm35585	predicted gene, 35585	within coordinates
Rr584887	regulatory region 584887	1932 bp proximal