rs49809013 SNP Detail

Summary

• ID
  rs49809013
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:139287510 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A TTTTTTTGCT TGAAACTTCC TCTTTCTGAT TTGAAAAGCT
  GTGTTTTTCA CAGCTTTAGT CTTGATTTCT GTTTCGGTTT CTTTCTTTTT ATATTAATAA
  R
  TGCTGTTCTT TGACAATTTC ATACATTCTG GTTACTTTCT CCCAACCCCT TATTTTCCTT
  CAGGGCCTGC CAGTCTGACT CCTTCCATAT AAATCCCTGC A                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss147661634	ENSMUSSNP3068427	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs49809013					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:139287510 () rs orientation: forward

Symbol	Name	Function Class
D2Mit339	DNA segment, Chr 2, Massachusetts Institute of Technology 339	840 bp distal