rs49821105 SNP Detail

Summary

• ID
  rs49821105
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:70016585 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGACTACAAA GATTAAGTAT
  GGCTCCCTTA GAAACTACAA TGAAGTGTTC TAGTGAAGGT GCTGTTTGAT GATTCACGAA
  GAATTCAAGG AAAGACTTAG CTGTTAGCAG ATATCATAGT TCAGATCACA GATTCTTGGA
  CTTTATTTCC ATTCTTATGA TTGATGTGGG CAGTCAATCA CACGATAGCT GACTCTTACC
  R
  TCCATTTTCA CCTAACAGGT TTAACTCGGA GAACAGCTGT AAACAGCATG TTTCTTACTT
  TGCTTTGGAG ACTATAGCTA CCAATTGAGG TACCTGTGTT ATATTCCCTA AAAAACTTCT
  TTGTATTTAT TATAAACGAC TACAAAATTA ATAAATATGG GACAGAAGAA AGCTACAAGA
  TGGACTTCAC CTTGATACAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147391133	ENSMUSSNP1056878	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49821105					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:70016585 () rs orientation: forward

Symbol	Name	Function Class
Gm50215	predicted gene, 50215	1710 bp downstream