rs49824869 SNP Detail

Summary

• ID
  rs49824869
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:32202694 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCCAGACAAA GTTACATTCT GAGACCCAGT CTCAACAGAA
  ACAAAACAAA AAGAGAGACA GTGCCAGAAA GGTGGCTCAG GGGCTAAGAC CATTTGCTGT
  T
  CTTCAGGAGG TCCTGAGTTC TGTCTCTACA CACATGTGGT GGTTCACAAC TGCTTGCAAG
  TCCAGCTCCA AGGGGTCTGA GTCCTCTTCT GTCCTTGGA                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss131932962	ENSMUSSNP209422	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs49824869					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:32202694 () rs orientation: forward

Symbol	Name	Function Class
Nprl3	nitrogen permease regulator-like 3	within coordinates
Rr349	regulatory region 349	1325 bp distal
Rr350	regulatory region 350	within coordinates
Rr923	regulatory region 923	1330 bp distal
Rr1084	regulatory region 1084	351 bp distal
Rr444552	regulatory region 444552	876 bp distal