rs49826757 SNP Detail

Summary

• ID
  rs49826757
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:67145941 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTTTG AAATAGACAC TTCAGATGGA
  T
  AAGAGCTCCC CTGGGAAATC AGAAT                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss132326623	ENSMUSSNP2693409	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss323719234	CHEV_11_67068617	CHEVERUD	SCREENING_POP	f	SNP			T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs49826757					SNP	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:67145941 () rs orientation: forward

Symbol	Name	Function Class
Myh4	myosin, heavy polypeptide 4, skeletal muscle	within coordinates
Tssr3528	transcription start site region 3528	372 bp downstream
Tssr3529	transcription start site region 3529	316 bp downstream
Tssr102201	transcription start site region 102201	1597 bp downstream
Tssr102202	transcription start site region 102202	1108 bp downstream
Tssr102203	transcription start site region 102203	1045 bp downstream
Tssr102204	transcription start site region 102204	649 bp downstream
Tssr102205	transcription start site region 102205	432 bp downstream
Tssr102206	transcription start site region 102206	328 bp downstream
Tssr102207	transcription start site region 102207	306 bp upstream
Tssr102208	transcription start site region 102208	476 bp upstream
Tssr102209	transcription start site region 102209	511 bp upstream
Tssr102210	transcription start site region 102210	529 bp upstream
Tssr102211	transcription start site region 102211	539 bp upstream
Tssr102212	transcription start site region 102212	561 bp upstream
Tssr102213	transcription start site region 102213	713 bp upstream
Tssr102214	transcription start site region 102214	1069 bp upstream
Tssr102215	transcription start site region 102215	1083 bp upstream
Tssr102216	transcription start site region 102216	1127 bp upstream
Tssr102217	transcription start site region 102217	1281 bp upstream
Tssr102218	transcription start site region 102218	1992 bp upstream
Tssr108536	transcription start site region 108536	1061 bp upstream
Tssr108537	transcription start site region 108537	1040 bp upstream
Tssr108538	transcription start site region 108538	530 bp upstream
Tssr108539	transcription start site region 108539	332 bp upstream
Tssr108540	transcription start site region 108540	274 bp upstream
Tssr108541	transcription start site region 108541	320 bp downstream
Tssr108542	transcription start site region 108542	481 bp downstream
Tssr108543	transcription start site region 108543	596 bp downstream
Tssr108544	transcription start site region 108544	1179 bp downstream